May 27, 2009

[Distinguishing Historical from Current Problems in Clinical Reports-‹Which Textual Features Help?>]

PRESENTER: Danielle Mowery, DBMI graduate student

Date and Time: Wednesday May 27 @ Noon

Venue:Senott Square Rm 6329

ABSTRACT

Determining whether a condition is historical or recent is important for accurate results in biomedicine. In this paper, we investigate four types of information found in clinical text that might be used to make this distinction. We conducted a descriptive, exploratory study using annotation on clinical reports to determine whether this temporal information is useful for classifying conditions as historical or recent. Our initial results suggest that few of these feature values can be used to predict temporal classification.

Posted by nlplab at 08:49 AM

[ONYX: A System for the Semantic Analysis of Clinical Text]

Presenter: Prof. Wendy Chapman, DBMI

Date and Time: Wednesday May 27 @ Noon

ABSTRACT

This paper introduces ONYX, a sentence-level text analyzer that implements a number of innovative ideas in syntactic and semantic analysis. ONYX is being developed as part of a project that seeks to translate spoken dental examinations directly into chartable findings.
ONYX integrates syntax and semantics to a high degree. It interprets sentences using a combination of probabilistic classifiers, graphical unification, and semantically annotated grammar rules. In this preliminary evaluation, ONYX shows inter-annotator agreement scores with humans of 86% for assigning semantic types to relevant words, 80% for inferring relevant concepts from words, and 76% for identifying relations between concepts.

Posted by nlplab at 08:40 AM